Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp25Q3U435 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Mmp25Q3U435 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp25Q3U435 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp25Q3U435 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mmp25Q3U435 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Mmp25Q3U435 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mmp25Q3U435 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.39■□□□□ 0.53
Mmp25Q3U435 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Mmp25Q3U435 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp25Q3U435 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp25Q3U435 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Mmp25Q3U435 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.36■□□□□ 0.53
Mmp25Q3U435 Gm27801-201ENSMUST00000184174 223 ntBASIC18.36■□□□□ 0.53
Mmp25Q3U435 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.36■□□□□ 0.53
Mmp25Q3U435 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp25Q3U435 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp25Q3U435 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp25Q3U435 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Mmp25Q3U435 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp25Q3U435 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp25Q3U435 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms