Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd3P97770 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd3P97770 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thumpd3P97770 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.79■□□□□ 0.76
Thumpd3P97770 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.79■□□□□ 0.76
Thumpd3P97770 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd3P97770 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd3P97770 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.79■□□□□ 0.76
Thumpd3P97770 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.79■□□□□ 0.76
Thumpd3P97770 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd3P97770 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd3P97770 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd3P97770 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd3P97770 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Thumpd3P97770 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd3P97770 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd3P97770 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.78■□□□□ 0.76
Thumpd3P97770 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.78■□□□□ 0.76
Thumpd3P97770 Golgb1-201ENSMUST00000023534 498 ntBASIC19.78■□□□□ 0.76
Thumpd3P97770 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd3P97770 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd3P97770 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.78■□□□□ 0.76
Thumpd3P97770 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd3P97770 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thumpd3P97770 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd3P97770 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd3P97770 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.77■□□□□ 0.76
Thumpd3P97770 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd3P97770 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd3P97770 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd3P97770 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
Thumpd3P97770 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd3P97770 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thumpd3P97770 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Thumpd3P97770 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.77■□□□□ 0.75
Thumpd3P97770 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Thumpd3P97770 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd3P97770 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.76■□□□□ 0.75
Thumpd3P97770 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.76■□□□□ 0.75
Thumpd3P97770 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.76■□□□□ 0.75
Thumpd3P97770 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.76■□□□□ 0.75
Thumpd3P97770 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd3P97770 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd3P97770 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd3P97770 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd3P97770 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd3P97770 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thumpd3P97770 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Gm12821-201ENSMUST00000120022 600 ntBASIC19.75■□□□□ 0.75
Thumpd3P97770 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Thumpd3P97770 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Thumpd3P97770 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thumpd3P97770 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd3P97770 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.74■□□□□ 0.75
Thumpd3P97770 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd3P97770 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.74■□□□□ 0.75
Thumpd3P97770 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd3P97770 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.74■□□□□ 0.75
Thumpd3P97770 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd3P97770 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd3P97770 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd3P97770 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Thumpd3P97770 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.73■□□□□ 0.75
Thumpd3P97770 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Thumpd3P97770 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Thumpd3P97770 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd3P97770 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Thumpd3P97770 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd3P97770 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd3P97770 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd3P97770 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.72■□□□□ 0.75
Thumpd3P97770 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Thumpd3P97770 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd3P97770 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Thumpd3P97770 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd3P97770 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd3P97770 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Thumpd3P97770 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd3P97770 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd3P97770 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Thumpd3P97770 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms