Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.94■□□□□ 0.78
Tubgcp3P58854 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.94■□□□□ 0.78
Tubgcp3P58854 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tubgcp3P58854 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Tubgcp3P58854 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tubgcp3P58854 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tubgcp3P58854 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tubgcp3P58854 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tubgcp3P58854 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tubgcp3P58854 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tubgcp3P58854 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Tubgcp3P58854 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tubgcp3P58854 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.91■□□□□ 0.78
Tubgcp3P58854 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tubgcp3P58854 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tubgcp3P58854 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tubgcp3P58854 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubgcp3P58854 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.88■□□□□ 0.77
Tubgcp3P58854 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Tubgcp3P58854 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubgcp3P58854 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubgcp3P58854 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubgcp3P58854 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubgcp3P58854 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubgcp3P58854 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubgcp3P58854 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Tubgcp3P58854 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubgcp3P58854 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.86■□□□□ 0.77
Tubgcp3P58854 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubgcp3P58854 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubgcp3P58854 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubgcp3P58854 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubgcp3P58854 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.86■□□□□ 0.77
Tubgcp3P58854 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tubgcp3P58854 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.85■□□□□ 0.77
Tubgcp3P58854 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubgcp3P58854 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tubgcp3P58854 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms