Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.57■□□□□ 0.72
Fen1P39749 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Fen1P39749 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Fen1P39749 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fen1P39749 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fen1P39749 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fen1P39749 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fen1P39749 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fen1P39749 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Fen1P39749 Gm13238-201ENSMUST00000117655 780 ntBASIC19.56■□□□□ 0.72
Fen1P39749 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fen1P39749 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.56■□□□□ 0.72
Fen1P39749 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fen1P39749 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fen1P39749 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fen1P39749 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fen1P39749 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fen1P39749 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.55■□□□□ 0.72
Fen1P39749 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.55■□□□□ 0.72
Fen1P39749 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Fen1P39749 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.55■□□□□ 0.72
Fen1P39749 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fen1P39749 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Fen1P39749 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Fen1P39749 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.54■□□□□ 0.72
Fen1P39749 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.54■□□□□ 0.72
Fen1P39749 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.54■□□□□ 0.72
Fen1P39749 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Fen1P39749 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fen1P39749 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fen1P39749 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.53■□□□□ 0.72
Fen1P39749 Gm43566-201ENSMUST00000196851 808 ntBASIC19.53■□□□□ 0.72
Fen1P39749 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fen1P39749 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Fen1P39749 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fen1P39749 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Fen1P39749 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.52■□□□□ 0.72
Fen1P39749 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fen1P39749 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fen1P39749 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fen1P39749 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fen1P39749 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.51■□□□□ 0.71
Fen1P39749 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fen1P39749 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fen1P39749 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Fen1P39749 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fen1P39749 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fen1P39749 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Fen1P39749 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Fen1P39749 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Fen1P39749 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fen1P39749 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fen1P39749 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Fen1P39749 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fen1P39749 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Fen1P39749 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fen1P39749 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fen1P39749 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fen1P39749 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.49■□□□□ 0.71
Fen1P39749 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fen1P39749 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Fen1P39749 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.48■□□□□ 0.71
Fen1P39749 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fen1P39749 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms