Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.48■□□□□ 0.71
Hoxb3P09026 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxb3P09026 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxb3P09026 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.48■□□□□ 0.71
Hoxb3P09026 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxb3P09026 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb3P09026 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb3P09026 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb3P09026 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb3P09026 Gm11643-201ENSMUST00000119578 864 ntBASIC19.47■□□□□ 0.71
Hoxb3P09026 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.47■□□□□ 0.71
Hoxb3P09026 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb3P09026 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb3P09026 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb3P09026 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb3P09026 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hoxb3P09026 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb3P09026 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hoxb3P09026 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Hoxb3P09026 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb3P09026 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb3P09026 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb3P09026 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb3P09026 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb3P09026 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb3P09026 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.45■□□□□ 0.7
Hoxb3P09026 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.45■□□□□ 0.7
Hoxb3P09026 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb3P09026 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb3P09026 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb3P09026 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb3P09026 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb3P09026 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Hoxb3P09026 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hoxb3P09026 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb3P09026 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb3P09026 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hoxb3P09026 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb3P09026 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb3P09026 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.44■□□□□ 0.7
Hoxb3P09026 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb3P09026 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb3P09026 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb3P09026 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb3P09026 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb3P09026 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb3P09026 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Hoxb3P09026 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb3P09026 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb3P09026 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.43■□□□□ 0.7
Hoxb3P09026 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hoxb3P09026 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb3P09026 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxb3P09026 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxb3P09026 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Hoxb3P09026 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Hoxb3P09026 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.42■□□□□ 0.7
Hoxb3P09026 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxb3P09026 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.42■□□□□ 0.7
Hoxb3P09026 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Hoxb3P09026 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxb3P09026 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hoxb3P09026 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hoxb3P09026 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hoxb3P09026 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
Hoxb3P09026 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hoxb3P09026 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxb3P09026 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb3P09026 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hoxb3P09026 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hoxb3P09026 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Hoxb3P09026 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxb3P09026 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hoxb3P09026 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms