Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3383J3QQ59 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3383J3QQ59 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm3383J3QQ59 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
Gm3383J3QQ59 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3383J3QQ59 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gm3383J3QQ59 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3383J3QQ59 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3383J3QQ59 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3383J3QQ59 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3383J3QQ59 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3383J3QQ59 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3383J3QQ59 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3383J3QQ59 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gm3383J3QQ59 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Gm3383J3QQ59 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Gm13148-201ENSMUST00000118892 745 ntBASIC21.16■□□□□ 0.98
Gm3383J3QQ59 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3383J3QQ59 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Gm38205-201ENSMUST00000192243 258 ntBASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Gm6365-201ENSMUST00000054711 744 ntBASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3383J3QQ59 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.14■□□□□ 0.98
Gm3383J3QQ59 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Gm3383J3QQ59 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Gm13534-201ENSMUST00000121169 513 ntBASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3383J3QQ59 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3383J3QQ59 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Gm3383J3QQ59 Gm12527-201ENSMUST00000117967 564 ntBASIC21.13■□□□□ 0.97
Gm3383J3QQ59 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.13■□□□□ 0.97
Gm3383J3QQ59 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm3383J3QQ59 Gm22240-201ENSMUST00000175225 82 ntBASIC21.13■□□□□ 0.97
Gm3383J3QQ59 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3383J3QQ59 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3383J3QQ59 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.13■□□□□ 0.97
Gm3383J3QQ59 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Gm3383J3QQ59 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Gm3383J3QQ59 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3383J3QQ59 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3383J3QQ59 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Gm3383J3QQ59 Gm8520-201ENSMUST00000186517 868 ntBASIC21.12■□□□□ 0.97
Gm3383J3QQ59 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.12■□□□□ 0.97
Gm3383J3QQ59 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3383J3QQ59 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3383J3QQ59 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3383J3QQ59 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3383J3QQ59 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3383J3QQ59 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.11■□□□□ 0.97
Gm3383J3QQ59 Gm5408-201ENSMUST00000197998 747 ntBASIC21.11■□□□□ 0.97
Gm3383J3QQ59 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3383J3QQ59 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3383J3QQ59 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms