Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm13241-201ENSMUST00000094493 780 ntBASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Lnp1A0A1B0GSK3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.27■□□□□ 0.19
Lnp1A0A1B0GSK3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.26■□□□□ 0.19
Lnp1A0A1B0GSK3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.25■□□□□ 0.19
Lnp1A0A1B0GSK3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lnp1A0A1B0GSK3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Gm43137-201ENSMUST00000198052 594 ntBASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lnp1A0A1B0GSK3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lnp1A0A1B0GSK3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lnp1A0A1B0GSK3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lnp1A0A1B0GSK3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lnp1A0A1B0GSK3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms