Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Gm43530-201ENSMUST00000195920 274 ntBASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-4A0A075B631 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Iqck-206ENSMUST00000208658 2891 ntBASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Etf1-202ENSMUST00000180351 108 ntBASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9n-4A0A075B631 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Gm15546-201ENSMUST00000122095 826 ntBASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9n-4A0A075B631 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav9n-4A0A075B631 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav9n-4A0A075B631 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.33□□□□□ -0.27
Trav9n-4A0A075B631 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Gm5812-201ENSMUST00000061073 957 ntBASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9n-4A0A075B631 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav9n-4A0A075B631 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav9n-4A0A075B631 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms