Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Gm43137-201ENSMUST00000198052 594 ntBASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn13Q9Z0S4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn13Q9Z0S4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn13Q9Z0S4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn13Q9Z0S4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.47■□□□□ 0.39
Cldn13Q9Z0S4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn13Q9Z0S4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn13Q9Z0S4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cldn13Q9Z0S4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn13Q9Z0S4 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.47■□□□□ 0.39
Cldn13Q9Z0S4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn13Q9Z0S4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn13Q9Z0S4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cldn13Q9Z0S4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn13Q9Z0S4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn13Q9Z0S4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.46■□□□□ 0.39
Cldn13Q9Z0S4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn13Q9Z0S4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cldn13Q9Z0S4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.46■□□□□ 0.39
Cldn13Q9Z0S4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cldn13Q9Z0S4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn13Q9Z0S4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn13Q9Z0S4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn13Q9Z0S4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn13Q9Z0S4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.44■□□□□ 0.38
Cldn13Q9Z0S4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn13Q9Z0S4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn13Q9Z0S4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cldn13Q9Z0S4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn13Q9Z0S4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.43■□□□□ 0.38
Cldn13Q9Z0S4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.43■□□□□ 0.38
Cldn13Q9Z0S4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn13Q9Z0S4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn13Q9Z0S4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn13Q9Z0S4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn13Q9Z0S4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn13Q9Z0S4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
Cldn13Q9Z0S4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn13Q9Z0S4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn13Q9Z0S4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.41■□□□□ 0.38
Cldn13Q9Z0S4 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.41■□□□□ 0.38
Cldn13Q9Z0S4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn13Q9Z0S4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn13Q9Z0S4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms