Protein–RNA interactions for Protein: Q9EQ41

Vmn1r29, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r29Q9EQ41 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.21■□□□□ 0.51
Vmn1r29Q9EQ41 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Vmn1r29Q9EQ41 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r29Q9EQ41 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r29Q9EQ41 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.21■□□□□ 0.5
Vmn1r29Q9EQ41 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r29Q9EQ41 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r29Q9EQ41 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r29Q9EQ41 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r29Q9EQ41 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r29Q9EQ41 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r29Q9EQ41 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r29Q9EQ41 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r29Q9EQ41 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r29Q9EQ41 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r29Q9EQ41 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r29Q9EQ41 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r29Q9EQ41 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.19■□□□□ 0.5
Vmn1r29Q9EQ41 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.19■□□□□ 0.5
Vmn1r29Q9EQ41 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r29Q9EQ41 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Gm7417-201ENSMUST00000192950 473 ntBASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.17■□□□□ 0.5
Vmn1r29Q9EQ41 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Vmn1r29Q9EQ41 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Etf1-202ENSMUST00000180351 108 ntBASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Gm5812-201ENSMUST00000061073 957 ntBASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Vmn1r29Q9EQ41 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vmn1r29Q9EQ41 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Golph3-205ENSMUST00000228671 2842 ntBASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vmn1r29Q9EQ41 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vmn1r29Q9EQ41 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vmn1r29Q9EQ41 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vmn1r29Q9EQ41 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vmn1r29Q9EQ41 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms