Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.37■□□□□ 0.69
Trim33Q99PP7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim33Q99PP7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.37■□□□□ 0.69
Trim33Q99PP7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim33Q99PP7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim33Q99PP7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim33Q99PP7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trim33Q99PP7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim33Q99PP7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim33Q99PP7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim33Q99PP7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim33Q99PP7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim33Q99PP7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim33Q99PP7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim33Q99PP7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim33Q99PP7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim33Q99PP7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim33Q99PP7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim33Q99PP7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim33Q99PP7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim33Q99PP7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim33Q99PP7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.34■□□□□ 0.69
Trim33Q99PP7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim33Q99PP7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim33Q99PP7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.34■□□□□ 0.69
Trim33Q99PP7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim33Q99PP7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Trim33Q99PP7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim33Q99PP7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim33Q99PP7 Gm45417-201ENSMUST00000209533 758 ntBASIC19.33■□□□□ 0.68
Trim33Q99PP7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim33Q99PP7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim33Q99PP7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim33Q99PP7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim33Q99PP7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim33Q99PP7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim33Q99PP7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim33Q99PP7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim33Q99PP7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim33Q99PP7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.32■□□□□ 0.68
Trim33Q99PP7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim33Q99PP7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim33Q99PP7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim33Q99PP7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.31■□□□□ 0.68
Trim33Q99PP7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim33Q99PP7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim33Q99PP7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim33Q99PP7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.29■□□□□ 0.68
Trim33Q99PP7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim33Q99PP7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim33Q99PP7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms