Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Gm9988-201ENSMUST00000069786 435 ntBASIC17.17■□□□□ 0.34
Scrt1Q99M85 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.17■□□□□ 0.34
Scrt1Q99M85 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scrt1Q99M85 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.16■□□□□ 0.34
Scrt1Q99M85 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scrt1Q99M85 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Gm11421-201ENSMUST00000122124 294 ntBASIC17.15■□□□□ 0.34
Scrt1Q99M85 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.15■□□□□ 0.34
Scrt1Q99M85 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scrt1Q99M85 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Scrt1Q99M85 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scrt1Q99M85 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scrt1Q99M85 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scrt1Q99M85 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.14■□□□□ 0.33
Scrt1Q99M85 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.14■□□□□ 0.33
Scrt1Q99M85 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scrt1Q99M85 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scrt1Q99M85 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Scrt1Q99M85 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scrt1Q99M85 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scrt1Q99M85 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.13■□□□□ 0.33
Scrt1Q99M85 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scrt1Q99M85 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scrt1Q99M85 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scrt1Q99M85 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scrt1Q99M85 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scrt1Q99M85 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scrt1Q99M85 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scrt1Q99M85 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scrt1Q99M85 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scrt1Q99M85 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Gm12933-201ENSMUST00000120203 872 ntBASIC17.11■□□□□ 0.33
Scrt1Q99M85 Nespas-201ENSMUST00000143738 1083 ntBASIC17.11■□□□□ 0.33
Scrt1Q99M85 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms