Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim60Q8VI40 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim60Q8VI40 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim60Q8VI40 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim60Q8VI40 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim60Q8VI40 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim60Q8VI40 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim60Q8VI40 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim60Q8VI40 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim60Q8VI40 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim60Q8VI40 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim60Q8VI40 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.28■□□□□ 0.84
Trim60Q8VI40 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim60Q8VI40 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim60Q8VI40 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim60Q8VI40 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim60Q8VI40 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim60Q8VI40 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim60Q8VI40 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim60Q8VI40 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trim60Q8VI40 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim60Q8VI40 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim60Q8VI40 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.27■□□□□ 0.83
Trim60Q8VI40 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim60Q8VI40 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim60Q8VI40 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim60Q8VI40 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim60Q8VI40 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim60Q8VI40 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim60Q8VI40 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim60Q8VI40 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim60Q8VI40 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim60Q8VI40 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim60Q8VI40 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Trim60Q8VI40 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Gm5812-201ENSMUST00000061073 957 ntBASIC20.24■□□□□ 0.83
Trim60Q8VI40 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim60Q8VI40 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim60Q8VI40 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Trim60Q8VI40 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim60Q8VI40 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim60Q8VI40 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim60Q8VI40 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim60Q8VI40 Gm15546-201ENSMUST00000122095 826 ntBASIC20.21■□□□□ 0.83
Trim60Q8VI40 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim60Q8VI40 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trim60Q8VI40 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim60Q8VI40 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim60Q8VI40 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trim60Q8VI40 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim60Q8VI40 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms