Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpap2Q8VC34 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpap2Q8VC34 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Gm45417-201ENSMUST00000209533 758 ntBASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rpap2Q8VC34 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpap2Q8VC34 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpap2Q8VC34 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpap2Q8VC34 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpap2Q8VC34 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.58■■□□□ 1.05
Rpap2Q8VC34 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rpap2Q8VC34 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpap2Q8VC34 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.58■■□□□ 1.05
Rpap2Q8VC34 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rpap2Q8VC34 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rpap2Q8VC34 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rpap2Q8VC34 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
Rpap2Q8VC34 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rpap2Q8VC34 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpap2Q8VC34 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpap2Q8VC34 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpap2Q8VC34 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rpap2Q8VC34 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpap2Q8VC34 Gm8493-201ENSMUST00000196881 489 ntBASIC21.56■■□□□ 1.04
Rpap2Q8VC34 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Rpap2Q8VC34 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Gm15039-201ENSMUST00000118914 875 ntBASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rpap2Q8VC34 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Serp2-204ENSMUST00000228055 705 ntBASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Gm6139-201ENSMUST00000079261 882 ntBASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpap2Q8VC34 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Gm43173-201ENSMUST00000202246 593 ntBASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rpap2Q8VC34 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpap2Q8VC34 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpap2Q8VC34 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpap2Q8VC34 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Rpap2Q8VC34 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpap2Q8VC34 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 157.2 ms