Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Gm43566-201ENSMUST00000196851 808 ntBASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd4Q8CC84 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lysmd4Q8CC84 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lysmd4Q8CC84 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.58■□□□□ 0.41
Lysmd4Q8CC84 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lysmd4Q8CC84 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lysmd4Q8CC84 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lysmd4Q8CC84 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lysmd4Q8CC84 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lysmd4Q8CC84 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lysmd4Q8CC84 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.54■□□□□ 0.4
Lysmd4Q8CC84 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms