Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim4Q8C1Q6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim4Q8C1Q6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Smim4Q8C1Q6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Golph3-202ENSMUST00000226517 2359 ntBASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smim4Q8C1Q6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smim4Q8C1Q6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Smim4Q8C1Q6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Smim4Q8C1Q6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim4Q8C1Q6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim4Q8C1Q6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smim4Q8C1Q6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms