Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp1Q8BJQ2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.86■□□□□ 0.93
Usp1Q8BJQ2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp1Q8BJQ2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp1Q8BJQ2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp1Q8BJQ2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Gm27801-201ENSMUST00000184174 223 ntBASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Gm9988-201ENSMUST00000069786 435 ntBASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp1Q8BJQ2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp1Q8BJQ2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp1Q8BJQ2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp1Q8BJQ2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp1Q8BJQ2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp1Q8BJQ2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp1Q8BJQ2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp1Q8BJQ2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.82■□□□□ 0.92
Usp1Q8BJQ2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.82■□□□□ 0.92
Usp1Q8BJQ2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp1Q8BJQ2 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.82■□□□□ 0.92
Usp1Q8BJQ2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp1Q8BJQ2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp1Q8BJQ2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Gm13234-201ENSMUST00000120010 747 ntBASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp1Q8BJQ2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Iqck-206ENSMUST00000208658 2891 ntBASIC20.79■□□□□ 0.92
Usp1Q8BJQ2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Usp1Q8BJQ2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp1Q8BJQ2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp1Q8BJQ2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
Usp1Q8BJQ2 Gm12933-201ENSMUST00000120203 872 ntBASIC20.77■□□□□ 0.92
Usp1Q8BJQ2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms