Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.76■■□□□ 1.07
Usp6nlQ80XC3 Gm13146-201ENSMUST00000118508 780 ntBASIC21.76■■□□□ 1.07
Usp6nlQ80XC3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.76■■□□□ 1.07
Usp6nlQ80XC3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Usp6nlQ80XC3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Usp6nlQ80XC3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp6nlQ80XC3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Usp6nlQ80XC3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Mir5133-201ENSMUST00000174955 77 ntBASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Usp6nlQ80XC3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp6nlQ80XC3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp6nlQ80XC3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp6nlQ80XC3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp6nlQ80XC3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp6nlQ80XC3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Usp6nlQ80XC3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Usp6nlQ80XC3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Usp6nlQ80XC3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp6nlQ80XC3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp6nlQ80XC3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Gm4968-201ENSMUST00000071458 858 ntBASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Usp6nlQ80XC3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Usp6nlQ80XC3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Usp6nlQ80XC3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Usp6nlQ80XC3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.68■■□□□ 1.06
Usp6nlQ80XC3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 Gm10653-202ENSMUST00000139570 835 ntBASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 Nespas-201ENSMUST00000143738 1083 ntBASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.67■■□□□ 1.06
Usp6nlQ80XC3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp6nlQ80XC3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms