Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Snx6Q6P8X1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Snx6Q6P8X1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snx6Q6P8X1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.71■□□□□ 0.59
Snx6Q6P8X1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Snx6Q6P8X1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Snx6Q6P8X1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Snx6Q6P8X1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.69■□□□□ 0.58
Snx6Q6P8X1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.68■□□□□ 0.58
Snx6Q6P8X1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Gm9847-201ENSMUST00000052528 599 ntBASIC18.67■□□□□ 0.58
Snx6Q6P8X1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx6Q6P8X1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx6Q6P8X1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx6Q6P8X1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx6Q6P8X1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx6Q6P8X1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.65■□□□□ 0.58
Snx6Q6P8X1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx6Q6P8X1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx6Q6P8X1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx6Q6P8X1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.64■□□□□ 0.57
Snx6Q6P8X1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Snx6Q6P8X1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.64■□□□□ 0.57
Snx6Q6P8X1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx6Q6P8X1 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.64■□□□□ 0.57
Snx6Q6P8X1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx6Q6P8X1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Snx6Q6P8X1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snx6Q6P8X1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms