Protein–RNA interactions for Protein: Q6P5C7

Znf728, Zinc finger protein 728, mousemouse

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf728Q6P5C7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Znf728Q6P5C7 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.45■□□□□ 0.7
Znf728Q6P5C7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf728Q6P5C7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf728Q6P5C7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf728Q6P5C7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf728Q6P5C7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Znf728Q6P5C7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Znf728Q6P5C7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf728Q6P5C7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Znf728Q6P5C7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf728Q6P5C7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf728Q6P5C7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.42■□□□□ 0.7
Znf728Q6P5C7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.42■□□□□ 0.7
Znf728Q6P5C7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.42■□□□□ 0.7
Znf728Q6P5C7 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.42■□□□□ 0.7
Znf728Q6P5C7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Znf728Q6P5C7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf728Q6P5C7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Gm4968-201ENSMUST00000071458 858 ntBASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.41■□□□□ 0.7
Znf728Q6P5C7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf728Q6P5C7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Znf728Q6P5C7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Znf728Q6P5C7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.39■□□□□ 0.69
Znf728Q6P5C7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf728Q6P5C7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf728Q6P5C7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf728Q6P5C7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf728Q6P5C7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Znf728Q6P5C7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Znf728Q6P5C7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Znf728Q6P5C7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Znf728Q6P5C7 Gm22240-201ENSMUST00000175225 82 ntBASIC19.36■□□□□ 0.69
Znf728Q6P5C7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Znf728Q6P5C7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms