Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.76■□□□□ 0.59
VcanQ62059 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VcanQ62059 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VcanQ62059 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VcanQ62059 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
VcanQ62059 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VcanQ62059 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VcanQ62059 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VcanQ62059 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.76■□□□□ 0.59
VcanQ62059 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VcanQ62059 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VcanQ62059 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VcanQ62059 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VcanQ62059 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VcanQ62059 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VcanQ62059 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
VcanQ62059 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.75■□□□□ 0.59
VcanQ62059 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VcanQ62059 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VcanQ62059 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VcanQ62059 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VcanQ62059 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.74■□□□□ 0.59
VcanQ62059 Gm27741-201ENSMUST00000185060 237 ntBASIC18.74■□□□□ 0.59
VcanQ62059 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VcanQ62059 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VcanQ62059 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VcanQ62059 Gm11249-201ENSMUST00000117071 859 ntBASIC18.74■□□□□ 0.59
VcanQ62059 Gm6433-201ENSMUST00000118634 875 ntBASIC18.74■□□□□ 0.59
VcanQ62059 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.74■□□□□ 0.59
VcanQ62059 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VcanQ62059 Gm10517-202ENSMUST00000192970 758 ntBASIC18.73■□□□□ 0.59
VcanQ62059 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VcanQ62059 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VcanQ62059 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VcanQ62059 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VcanQ62059 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
VcanQ62059 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VcanQ62059 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VcanQ62059 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VcanQ62059 Gm5643-201ENSMUST00000117081 966 ntBASIC18.72■□□□□ 0.59
VcanQ62059 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.72■□□□□ 0.59
VcanQ62059 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VcanQ62059 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.72■□□□□ 0.59
VcanQ62059 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.72■□□□□ 0.59
VcanQ62059 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VcanQ62059 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VcanQ62059 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VcanQ62059 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VcanQ62059 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VcanQ62059 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
VcanQ62059 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.71■□□□□ 0.59
VcanQ62059 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.71■□□□□ 0.59
VcanQ62059 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.71■□□□□ 0.59
VcanQ62059 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VcanQ62059 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VcanQ62059 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VcanQ62059 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VcanQ62059 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VcanQ62059 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VcanQ62059 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.7■□□□□ 0.58
VcanQ62059 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VcanQ62059 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VcanQ62059 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VcanQ62059 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
VcanQ62059 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.69■□□□□ 0.58
VcanQ62059 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VcanQ62059 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VcanQ62059 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VcanQ62059 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VcanQ62059 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VcanQ62059 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.69■□□□□ 0.58
VcanQ62059 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VcanQ62059 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VcanQ62059 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VcanQ62059 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VcanQ62059 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
VcanQ62059 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VcanQ62059 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VcanQ62059 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VcanQ62059 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.68■□□□□ 0.58
VcanQ62059 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VcanQ62059 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VcanQ62059 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VcanQ62059 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VcanQ62059 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VcanQ62059 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
VcanQ62059 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VcanQ62059 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.67■□□□□ 0.58
VcanQ62059 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms