Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.76■□□□□ 0.27
Clns1aQ61189 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.75■□□□□ 0.27
Clns1aQ61189 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clns1aQ61189 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clns1aQ61189 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clns1aQ61189 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clns1aQ61189 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clns1aQ61189 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Clns1aQ61189 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Clns1aQ61189 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.74■□□□□ 0.27
Clns1aQ61189 Gm7332-201ENSMUST00000118351 454 ntBASIC16.74■□□□□ 0.27
Clns1aQ61189 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.74■□□□□ 0.27
Clns1aQ61189 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clns1aQ61189 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clns1aQ61189 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clns1aQ61189 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Clns1aQ61189 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clns1aQ61189 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.72■□□□□ 0.27
Clns1aQ61189 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.72■□□□□ 0.27
Clns1aQ61189 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Clns1aQ61189 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clns1aQ61189 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.71■□□□□ 0.27
Clns1aQ61189 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Clns1aQ61189 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clns1aQ61189 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.71■□□□□ 0.26
Clns1aQ61189 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Clns1aQ61189 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Clns1aQ61189 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.7■□□□□ 0.26
Clns1aQ61189 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Clns1aQ61189 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Clns1aQ61189 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.7■□□□□ 0.26
Clns1aQ61189 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clns1aQ61189 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Clns1aQ61189 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clns1aQ61189 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clns1aQ61189 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clns1aQ61189 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clns1aQ61189 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clns1aQ61189 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.69■□□□□ 0.26
Clns1aQ61189 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clns1aQ61189 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clns1aQ61189 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clns1aQ61189 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clns1aQ61189 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clns1aQ61189 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms