Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.76■□□□□ 0.91
Znf235Q61116 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Znf235Q61116 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Znf235Q61116 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Znf235Q61116 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Znf235Q61116 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.75■□□□□ 0.91
Znf235Q61116 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Znf235Q61116 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Znf235Q61116 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Znf235Q61116 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Znf235Q61116 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Znf235Q61116 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Znf235Q61116 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Znf235Q61116 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.74■□□□□ 0.91
Znf235Q61116 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.74■□□□□ 0.91
Znf235Q61116 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Gm18671-201ENSMUST00000214826 683 ntBASIC20.74■□□□□ 0.91
Znf235Q61116 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Gm9988-201ENSMUST00000069786 435 ntBASIC20.74■□□□□ 0.91
Znf235Q61116 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Znf235Q61116 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.73■□□□□ 0.91
Znf235Q61116 Gm13234-201ENSMUST00000120010 747 ntBASIC20.73■□□□□ 0.91
Znf235Q61116 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Znf235Q61116 Gm37179-201ENSMUST00000194862 823 ntBASIC20.73■□□□□ 0.91
Znf235Q61116 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Znf235Q61116 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Znf235Q61116 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Znf235Q61116 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Znf235Q61116 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Znf235Q61116 Gm42778-201ENSMUST00000199644 553 ntBASIC20.72■□□□□ 0.91
Znf235Q61116 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Znf235Q61116 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Znf235Q61116 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Znf235Q61116 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.72■□□□□ 0.91
Znf235Q61116 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Znf235Q61116 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Znf235Q61116 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Znf235Q61116 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Znf235Q61116 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Znf235Q61116 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.71■□□□□ 0.91
Znf235Q61116 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Znf235Q61116 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Znf235Q61116 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.71■□□□□ 0.91
Znf235Q61116 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.71■□□□□ 0.91
Znf235Q61116 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.71■□□□□ 0.91
Znf235Q61116 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Znf235Q61116 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Znf235Q61116 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.71■□□□□ 0.91
Znf235Q61116 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.71■□□□□ 0.91
Znf235Q61116 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Znf235Q61116 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Znf235Q61116 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Znf235Q61116 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.7■□□□□ 0.9
Znf235Q61116 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Znf235Q61116 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Znf235Q61116 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Znf235Q61116 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Znf235Q61116 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Znf235Q61116 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Znf235Q61116 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Znf235Q61116 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Znf235Q61116 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Znf235Q61116 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Znf235Q61116 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Znf235Q61116 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Znf235Q61116 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Znf235Q61116 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Znf235Q61116 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Znf235Q61116 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Znf235Q61116 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms