Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-3Q5R1E6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav6-3Q5R1E6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-3Q5R1E6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav6-3Q5R1E6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-3Q5R1E6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Gm22238-201ENSMUST00000175222 88 ntBASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-3Q5R1E6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-3Q5R1E6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-3Q5R1E6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trav6-3Q5R1E6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.1
Trav6-3Q5R1E6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6-3Q5R1E6 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.71■□□□□ 0.1
Trav6-3Q5R1E6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 AA386476-201ENSMUST00000098781 1665 ntBASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-3Q5R1E6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-3Q5R1E6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav6-3Q5R1E6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav6-3Q5R1E6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-3Q5R1E6 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.69■□□□□ 0.1
Trav6-3Q5R1E6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-3Q5R1E6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 341.9 ms