Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.21■□□□□ 0.03
Pfn1P62962 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pfn1P62962 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pfn1P62962 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.21■□□□□ 0.03
Pfn1P62962 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.21■□□□□ 0.02
Pfn1P62962 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.21■□□□□ 0.02
Pfn1P62962 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.2■□□□□ 0.02
Pfn1P62962 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Gm7332-201ENSMUST00000118351 454 ntBASIC15.2■□□□□ 0.02
Pfn1P62962 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pfn1P62962 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.2■□□□□ 0.02
Pfn1P62962 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.2■□□□□ 0.02
Pfn1P62962 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pfn1P62962 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pfn1P62962 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pfn1P62962 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.19■□□□□ 0.02
Pfn1P62962 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pfn1P62962 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.18■□□□□ 0.02
Pfn1P62962 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pfn1P62962 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pfn1P62962 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pfn1P62962 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pfn1P62962 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pfn1P62962 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pfn1P62962 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pfn1P62962 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pfn1P62962 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pfn1P62962 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.17■□□□□ 0.02
Pfn1P62962 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.17■□□□□ 0.02
Pfn1P62962 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pfn1P62962 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pfn1P62962 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pfn1P62962 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.16■□□□□ 0.02
Pfn1P62962 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pfn1P62962 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.16■□□□□ 0.02
Pfn1P62962 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pfn1P62962 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.15■□□□□ 0.02
Pfn1P62962 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.15■□□□□ 0.02
Pfn1P62962 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Pfn1P62962 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.15■□□□□ 0.02
Pfn1P62962 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pfn1P62962 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Pfn1P62962 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.15■□□□□ 0.02
Pfn1P62962 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pfn1P62962 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pfn1P62962 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pfn1P62962 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pfn1P62962 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pfn1P62962 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms