Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc1a3P56564 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Slc1a3P56564 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc1a3P56564 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Slc1a3P56564 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc1a3P56564 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Slc1a3P56564 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc1a3P56564 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.57■□□□□ 0.4
Slc1a3P56564 Mir6236-201ENSMUST00000184437 123 ntBASIC17.57■□□□□ 0.4
Slc1a3P56564 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.57■□□□□ 0.4
Slc1a3P56564 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.57■□□□□ 0.4
Slc1a3P56564 Cap2-205ENSMUST00000225824 1634 ntBASIC17.57■□□□□ 0.4
Slc1a3P56564 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a3P56564 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a3P56564 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a3P56564 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a3P56564 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.56■□□□□ 0.4
Slc1a3P56564 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a3P56564 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a3P56564 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a3P56564 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a3P56564 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a3P56564 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a3P56564 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a3P56564 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a3P56564 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a3P56564 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc1a3P56564 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a3P56564 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a3P56564 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc1a3P56564 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.55■□□□□ 0.4
Slc1a3P56564 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a3P56564 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a3P56564 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a3P56564 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a3P56564 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc1a3P56564 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a3P56564 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc1a3P56564 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc1a3P56564 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slc1a3P56564 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc1a3P56564 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Slc1a3P56564 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc1a3P56564 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc1a3P56564 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc1a3P56564 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Gm13238-201ENSMUST00000117655 780 ntBASIC17.53■□□□□ 0.4
Slc1a3P56564 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc1a3P56564 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Slc1a3P56564 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slc1a3P56564 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc1a3P56564 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Slc1a3P56564 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc1a3P56564 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc1a3P56564 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc1a3P56564 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc1a3P56564 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc1a3P56564 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc1a3P56564 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc1a3P56564 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc1a3P56564 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.51■□□□□ 0.39
Slc1a3P56564 Gm43566-201ENSMUST00000196851 808 ntBASIC17.51■□□□□ 0.39
Slc1a3P56564 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.51■□□□□ 0.39
Slc1a3P56564 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc1a3P56564 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc1a3P56564 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms