Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Fen1P39749 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.65■□□□□ 0.74
Fen1P39749 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fen1P39749 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Fen1P39749 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Fen1P39749 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Fen1P39749 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fen1P39749 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fen1P39749 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fen1P39749 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fen1P39749 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Fen1P39749 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Fen1P39749 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.63■□□□□ 0.73
Fen1P39749 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.63■□□□□ 0.73
Fen1P39749 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fen1P39749 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Fen1P39749 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Fen1P39749 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fen1P39749 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Fen1P39749 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.62■□□□□ 0.73
Fen1P39749 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.62■□□□□ 0.73
Fen1P39749 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Fen1P39749 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fen1P39749 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fen1P39749 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fen1P39749 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.62■□□□□ 0.73
Fen1P39749 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fen1P39749 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fen1P39749 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Fen1P39749 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fen1P39749 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.61■□□□□ 0.73
Fen1P39749 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fen1P39749 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Fen1P39749 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Fen1P39749 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.61■□□□□ 0.73
Fen1P39749 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fen1P39749 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fen1P39749 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Fen1P39749 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Fen1P39749 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Fen1P39749 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fen1P39749 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Fen1P39749 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fen1P39749 Gm15820-201ENSMUST00000201566 728 ntBASIC19.6■□□□□ 0.73
Fen1P39749 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Fen1P39749 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fen1P39749 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Fen1P39749 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Fen1P39749 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fen1P39749 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Fen1P39749 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fen1P39749 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fen1P39749 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Fen1P39749 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.59■□□□□ 0.73
Fen1P39749 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Fen1P39749 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fen1P39749 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.59■□□□□ 0.73
Fen1P39749 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.59■□□□□ 0.73
Fen1P39749 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Fen1P39749 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Fen1P39749 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Fen1P39749 Gm10399-202ENSMUST00000202768 748 ntBASIC19.58■□□□□ 0.72
Fen1P39749 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fen1P39749 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fen1P39749 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fen1P39749 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fen1P39749 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Fen1P39749 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Fen1P39749 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fen1P39749 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fen1P39749 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fen1P39749 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms