Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tuba1bP05213 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tuba1bP05213 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tuba1bP05213 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tuba1bP05213 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tuba1bP05213 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tuba1bP05213 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Tuba1bP05213 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tuba1bP05213 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.11■□□□□ 0.49
Tuba1bP05213 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tuba1bP05213 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.11■□□□□ 0.49
Tuba1bP05213 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tuba1bP05213 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tuba1bP05213 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tuba1bP05213 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tuba1bP05213 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tuba1bP05213 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tuba1bP05213 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tuba1bP05213 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tuba1bP05213 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tuba1bP05213 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tuba1bP05213 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.1■□□□□ 0.49
Tuba1bP05213 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tuba1bP05213 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tuba1bP05213 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tuba1bP05213 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tuba1bP05213 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tuba1bP05213 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.09■□□□□ 0.49
Tuba1bP05213 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tuba1bP05213 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
Tuba1bP05213 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tuba1bP05213 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tuba1bP05213 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Tuba1bP05213 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tuba1bP05213 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.08■□□□□ 0.49
Tuba1bP05213 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Tuba1bP05213 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tuba1bP05213 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.08■□□□□ 0.48
Tuba1bP05213 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tuba1bP05213 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tuba1bP05213 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Tuba1bP05213 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tuba1bP05213 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Tuba1bP05213 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tuba1bP05213 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tuba1bP05213 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tuba1bP05213 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.06■□□□□ 0.48
Tuba1bP05213 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tuba1bP05213 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.06■□□□□ 0.48
Tuba1bP05213 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.06■□□□□ 0.48
Tuba1bP05213 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.06■□□□□ 0.48
Tuba1bP05213 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tuba1bP05213 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tuba1bP05213 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tuba1bP05213 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tuba1bP05213 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tuba1bP05213 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tuba1bP05213 Golph3-205ENSMUST00000228671 2842 ntBASIC18.05■□□□□ 0.48
Tuba1bP05213 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tuba1bP05213 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Tuba1bP05213 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tuba1bP05213 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.05■□□□□ 0.48
Tuba1bP05213 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.05■□□□□ 0.48
Tuba1bP05213 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Tuba1bP05213 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.05■□□□□ 0.48
Tuba1bP05213 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tuba1bP05213 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tuba1bP05213 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tuba1bP05213 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tuba1bP05213 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tuba1bP05213 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tuba1bP05213 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tuba1bP05213 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tuba1bP05213 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tuba1bP05213 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tuba1bP05213 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tuba1bP05213 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Tuba1bP05213 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tuba1bP05213 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tuba1bP05213 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 183 ms