Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Iqck-206ENSMUST00000208658 2891 ntBASIC15.26■□□□□ 0.03
P04944 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04944 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04944 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P04944 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04944 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Gm12922-201ENSMUST00000120626 809 ntBASIC15.24■□□□□ 0.03
P04944 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
P04944 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P04944 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
P04944 Golgb1-201ENSMUST00000023534 498 ntBASIC15.24■□□□□ 0.03
P04944 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P04944 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
P04944 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
P04944 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04944 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.23■□□□□ 0.03
P04944 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.23■□□□□ 0.03
P04944 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04944 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04944 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04944 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P04944 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04944 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P04944 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04944 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
P04944 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
P04944 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04944 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.22■□□□□ 0.03
P04944 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04944 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04944 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04944 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04944 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04944 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04944 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.21■□□□□ 0.03
P04944 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04944 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.21■□□□□ 0.03
P04944 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.21■□□□□ 0.03
P04944 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04944 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04944 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04944 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04944 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.2■□□□□ 0.02
P04944 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
P04944 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04944 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04944 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04944 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04944 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.19■□□□□ 0.02
P04944 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04944 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04944 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
P04944 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.19■□□□□ 0.02
P04944 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.19■□□□□ 0.02
P04944 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04944 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
P04944 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04944 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.19■□□□□ 0.02
P04944 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04944 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms