Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Gm3383J3QQ59 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Gm3383J3QQ59 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.29■■□□□ 1
Gm3383J3QQ59 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3383J3QQ59 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3383J3QQ59 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3383J3QQ59 Nespas-201ENSMUST00000143738 1083 ntBASIC21.28■■□□□ 1
Gm3383J3QQ59 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.28■■□□□ 1
Gm3383J3QQ59 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Gm3383J3QQ59 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3383J3QQ59 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3383J3QQ59 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3383J3QQ59 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3383J3QQ59 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Gm3383J3QQ59 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3383J3QQ59 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3383J3QQ59 Gm7290-201ENSMUST00000104990 617 ntBASIC21.27■■□□□ 1
Gm3383J3QQ59 Gm12918-201ENSMUST00000120234 636 ntBASIC21.27■■□□□ 1
Gm3383J3QQ59 Gm15710-201ENSMUST00000121821 636 ntBASIC21.27■■□□□ 1
Gm3383J3QQ59 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm3383J3QQ59 Gm5075-201ENSMUST00000196916 622 ntBASIC21.27■■□□□ 1
Gm3383J3QQ59 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.27■■□□□ 1
Gm3383J3QQ59 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.27■■□□□ 1
Gm3383J3QQ59 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Gm3383J3QQ59 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm3383J3QQ59 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3383J3QQ59 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3383J3QQ59 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3383J3QQ59 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3383J3QQ59 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3383J3QQ59 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3383J3QQ59 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3383J3QQ59 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3383J3QQ59 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3383J3QQ59 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3383J3QQ59 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3383J3QQ59 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Gm10653-202ENSMUST00000139570 835 ntBASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Gm20760-201ENSMUST00000179197 648 ntBASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3383J3QQ59 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3383J3QQ59 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3383J3QQ59 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3383J3QQ59 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Gm3383J3QQ59 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms