Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.3■□□□□ 0.68
Col9a3A2ACT7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col9a3A2ACT7 Gm38205-201ENSMUST00000192243 258 ntBASIC19.3■□□□□ 0.68
Col9a3A2ACT7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col9a3A2ACT7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col9a3A2ACT7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col9a3A2ACT7 Gm12527-201ENSMUST00000117967 564 ntBASIC19.28■□□□□ 0.68
Col9a3A2ACT7 Gm13146-201ENSMUST00000118508 780 ntBASIC19.28■□□□□ 0.68
Col9a3A2ACT7 Gm13148-201ENSMUST00000118892 745 ntBASIC19.28■□□□□ 0.68
Col9a3A2ACT7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.28■□□□□ 0.68
Col9a3A2ACT7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.28■□□□□ 0.68
Col9a3A2ACT7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col9a3A2ACT7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col9a3A2ACT7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Col9a3A2ACT7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col9a3A2ACT7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Gm6365-201ENSMUST00000054711 744 ntBASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col9a3A2ACT7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col9a3A2ACT7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col9a3A2ACT7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col9a3A2ACT7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.25■□□□□ 0.67
Col9a3A2ACT7 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.25■□□□□ 0.67
Col9a3A2ACT7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.25■□□□□ 0.67
Col9a3A2ACT7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col9a3A2ACT7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col9a3A2ACT7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col9a3A2ACT7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col9a3A2ACT7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.24■□□□□ 0.67
Col9a3A2ACT7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col9a3A2ACT7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col9a3A2ACT7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col9a3A2ACT7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col9a3A2ACT7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col9a3A2ACT7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.23■□□□□ 0.67
Col9a3A2ACT7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col9a3A2ACT7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col9a3A2ACT7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col9a3A2ACT7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col9a3A2ACT7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col9a3A2ACT7 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.21■□□□□ 0.67
Col9a3A2ACT7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col9a3A2ACT7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col9a3A2ACT7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.21■□□□□ 0.67
Col9a3A2ACT7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col9a3A2ACT7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms