Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lnp1A0A1B0GSK3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lnp1A0A1B0GSK3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lnp1A0A1B0GSK3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lnp1A0A1B0GSK3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lnp1A0A1B0GSK3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lnp1A0A1B0GSK3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lnp1A0A1B0GSK3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lnp1A0A1B0GSK3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lnp1A0A1B0GSK3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Lnp1A0A1B0GSK3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lnp1A0A1B0GSK3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Lnp1A0A1B0GSK3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lnp1A0A1B0GSK3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.33■□□□□ 0.2
Lnp1A0A1B0GSK3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lnp1A0A1B0GSK3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Lnp1A0A1B0GSK3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
Lnp1A0A1B0GSK3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lnp1A0A1B0GSK3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lnp1A0A1B0GSK3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lnp1A0A1B0GSK3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lnp1A0A1B0GSK3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lnp1A0A1B0GSK3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lnp1A0A1B0GSK3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
Lnp1A0A1B0GSK3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms