Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav17A0A075B655 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav17A0A075B655 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav17A0A075B655 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Trav17A0A075B655 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav17A0A075B655 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav17A0A075B655 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav17A0A075B655 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav17A0A075B655 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav17A0A075B655 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav17A0A075B655 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav17A0A075B655 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav17A0A075B655 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav17A0A075B655 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav17A0A075B655 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav17A0A075B655 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav17A0A075B655 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Gm7143-201ENSMUST00000222811 859 ntBASIC15.57■□□□□ 0.08
Trav17A0A075B655 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav17A0A075B655 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav17A0A075B655 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav17A0A075B655 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav17A0A075B655 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Mir6236-201ENSMUST00000184437 123 ntBASIC15.54■□□□□ 0.08
Trav17A0A075B655 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav17A0A075B655 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.53■□□□□ 0.08
Trav17A0A075B655 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav17A0A075B655 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav17A0A075B655 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav17A0A075B655 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav17A0A075B655 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Trav17A0A075B655 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms