Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-4A0A075B631 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-4A0A075B631 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-4A0A075B631 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Trav9n-4A0A075B631 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Gm7417-201ENSMUST00000192950 473 ntBASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-4A0A075B631 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Mir6236-201ENSMUST00000184437 123 ntBASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-4A0A075B631 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Gm9870-201ENSMUST00000063874 645 ntBASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-4A0A075B631 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms