Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb1S4R1E0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.78■□□□□ 0.44
H2afb1S4R1E0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
H2afb1S4R1E0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb1S4R1E0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb1S4R1E0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb1S4R1E0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
H2afb1S4R1E0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb1S4R1E0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb1S4R1E0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.77■□□□□ 0.44
H2afb1S4R1E0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2afb1S4R1E0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb1S4R1E0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.75■□□□□ 0.43
H2afb1S4R1E0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
H2afb1S4R1E0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb1S4R1E0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.73■□□□□ 0.43
H2afb1S4R1E0 Gm7417-201ENSMUST00000192950 473 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms