Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn13Q9Z0S4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn13Q9Z0S4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn13Q9Z0S4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn13Q9Z0S4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.57■□□□□ 0.4
Cldn13Q9Z0S4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn13Q9Z0S4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Gm15039-201ENSMUST00000118914 875 ntBASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldn13Q9Z0S4 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn13Q9Z0S4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cldn13Q9Z0S4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn13Q9Z0S4 Gm45417-201ENSMUST00000209533 758 ntBASIC17.53■□□□□ 0.4
Cldn13Q9Z0S4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn13Q9Z0S4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn13Q9Z0S4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cldn13Q9Z0S4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn13Q9Z0S4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn13Q9Z0S4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn13Q9Z0S4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn13Q9Z0S4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.52■□□□□ 0.39
Cldn13Q9Z0S4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn13Q9Z0S4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms