Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mbd3l1Q9D9H3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mbd3l1Q9D9H3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Mbd3l1Q9D9H3 Gm9812-201ENSMUST00000061934 968 ntBASIC17.09■□□□□ 0.33
Mbd3l1Q9D9H3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mbd3l1Q9D9H3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mbd3l1Q9D9H3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mbd3l1Q9D9H3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mbd3l1Q9D9H3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mbd3l1Q9D9H3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mbd3l1Q9D9H3 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.08■□□□□ 0.33
Mbd3l1Q9D9H3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Mbd3l1Q9D9H3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mbd3l1Q9D9H3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mbd3l1Q9D9H3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Gm24804-201ENSMUST00000174982 85 ntBASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.08■□□□□ 0.32
Mbd3l1Q9D9H3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mbd3l1Q9D9H3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mbd3l1Q9D9H3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mbd3l1Q9D9H3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mbd3l1Q9D9H3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mbd3l1Q9D9H3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Mbd3l1Q9D9H3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mbd3l1Q9D9H3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mbd3l1Q9D9H3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mbd3l1Q9D9H3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mbd3l1Q9D9H3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Mbd3l1Q9D9H3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mbd3l1Q9D9H3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.04■□□□□ 0.32
Mbd3l1Q9D9H3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mbd3l1Q9D9H3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mbd3l1Q9D9H3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mbd3l1Q9D9H3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mbd3l1Q9D9H3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mbd3l1Q9D9H3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms