Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim33Q99PP7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.46■□□□□ 0.71
Trim33Q99PP7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Trim33Q99PP7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim33Q99PP7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim33Q99PP7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim33Q99PP7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.44■□□□□ 0.7
Trim33Q99PP7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim33Q99PP7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim33Q99PP7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim33Q99PP7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim33Q99PP7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim33Q99PP7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim33Q99PP7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim33Q99PP7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim33Q99PP7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim33Q99PP7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim33Q99PP7 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.43■□□□□ 0.7
Trim33Q99PP7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Trim33Q99PP7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim33Q99PP7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Trim33Q99PP7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim33Q99PP7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.42■□□□□ 0.7
Trim33Q99PP7 Gm43137-201ENSMUST00000198052 594 ntBASIC19.42■□□□□ 0.7
Trim33Q99PP7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim33Q99PP7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.42■□□□□ 0.7
Trim33Q99PP7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim33Q99PP7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim33Q99PP7 Gm12821-201ENSMUST00000120022 600 ntBASIC19.41■□□□□ 0.7
Trim33Q99PP7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim33Q99PP7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim33Q99PP7 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.41■□□□□ 0.7
Trim33Q99PP7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim33Q99PP7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim33Q99PP7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim33Q99PP7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim33Q99PP7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim33Q99PP7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim33Q99PP7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim33Q99PP7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim33Q99PP7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim33Q99PP7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.4■□□□□ 0.7
Trim33Q99PP7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim33Q99PP7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim33Q99PP7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim33Q99PP7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim33Q99PP7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim33Q99PP7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim33Q99PP7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim33Q99PP7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim33Q99PP7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Trim33Q99PP7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Trim33Q99PP7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim33Q99PP7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim33Q99PP7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim33Q99PP7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim33Q99PP7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim33Q99PP7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim33Q99PP7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim33Q99PP7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Trim33Q99PP7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim33Q99PP7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim33Q99PP7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim33Q99PP7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Trim33Q99PP7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim33Q99PP7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms