Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col20a1Q923P0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Col20a1Q923P0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col20a1Q923P0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Col20a1Q923P0 Gm42778-201ENSMUST00000199644 553 ntBASIC23.4■■□□□ 1.34
Col20a1Q923P0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col20a1Q923P0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col20a1Q923P0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col20a1Q923P0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col20a1Q923P0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Col20a1Q923P0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Col20a1Q923P0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Col20a1Q923P0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Col20a1Q923P0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.39■■□□□ 1.34
Col20a1Q923P0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Col20a1Q923P0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Col20a1Q923P0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Col20a1Q923P0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col20a1Q923P0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col20a1Q923P0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
Col20a1Q923P0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Col20a1Q923P0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col20a1Q923P0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col20a1Q923P0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col20a1Q923P0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Col20a1Q923P0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col20a1Q923P0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col20a1Q923P0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.37■■□□□ 1.33
Col20a1Q923P0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col20a1Q923P0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col20a1Q923P0 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.37■■□□□ 1.33
Col20a1Q923P0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col20a1Q923P0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.37■■□□□ 1.33
Col20a1Q923P0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col20a1Q923P0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col20a1Q923P0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col20a1Q923P0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Col20a1Q923P0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Gm9988-201ENSMUST00000069786 435 ntBASIC23.36■■□□□ 1.33
Col20a1Q923P0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.36■■□□□ 1.33
Col20a1Q923P0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col20a1Q923P0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.35■■□□□ 1.33
Col20a1Q923P0 AV356131-201ENSMUST00000206201 750 ntBASIC23.35■■□□□ 1.33
Col20a1Q923P0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.35■■□□□ 1.33
Col20a1Q923P0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col20a1Q923P0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col20a1Q923P0 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.35■■□□□ 1.33
Col20a1Q923P0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col20a1Q923P0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Col20a1Q923P0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col20a1Q923P0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col20a1Q923P0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col20a1Q923P0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col20a1Q923P0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col20a1Q923P0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col20a1Q923P0 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.34■■□□□ 1.33
Col20a1Q923P0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col20a1Q923P0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col20a1Q923P0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col20a1Q923P0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col20a1Q923P0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.34■■□□□ 1.33
Col20a1Q923P0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col20a1Q923P0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Col20a1Q923P0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col20a1Q923P0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col20a1Q923P0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col20a1Q923P0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col20a1Q923P0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col20a1Q923P0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col20a1Q923P0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Col20a1Q923P0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col20a1Q923P0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col20a1Q923P0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
Col20a1Q923P0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.33■■□□□ 1.32
Col20a1Q923P0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col20a1Q923P0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col20a1Q923P0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Col20a1Q923P0 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms