Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb2Q91Y00 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.94■□□□□ 0.94
Pcdhb2Q91Y00 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb2Q91Y00 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb2Q91Y00 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb2Q91Y00 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb2Q91Y00 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.94■□□□□ 0.94
Pcdhb2Q91Y00 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb2Q91Y00 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhb2Q91Y00 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb2Q91Y00 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Gm26833-201ENSMUST00000180899 440 ntBASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb2Q91Y00 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb2Q91Y00 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.89■□□□□ 0.94
Pcdhb2Q91Y00 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb2Q91Y00 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb2Q91Y00 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.89■□□□□ 0.93
Pcdhb2Q91Y00 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.89■□□□□ 0.93
Pcdhb2Q91Y00 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb2Q91Y00 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.89■□□□□ 0.93
Pcdhb2Q91Y00 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
Pcdhb2Q91Y00 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhb2Q91Y00 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb2Q91Y00 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhb2Q91Y00 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.87■□□□□ 0.93
Pcdhb2Q91Y00 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb2Q91Y00 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhb2Q91Y00 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb2Q91Y00 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb2Q91Y00 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms