Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Ddx41Q91VN6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx41Q91VN6 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.55■■□□□ 1.2
Ddx41Q91VN6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx41Q91VN6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ddx41Q91VN6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx41Q91VN6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.55■■□□□ 1.2
Ddx41Q91VN6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx41Q91VN6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx41Q91VN6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx41Q91VN6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.54■■□□□ 1.2
Ddx41Q91VN6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.54■■□□□ 1.2
Ddx41Q91VN6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx41Q91VN6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx41Q91VN6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx41Q91VN6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx41Q91VN6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx41Q91VN6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx41Q91VN6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx41Q91VN6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx41Q91VN6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx41Q91VN6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx41Q91VN6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx41Q91VN6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx41Q91VN6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx41Q91VN6 Gm26833-201ENSMUST00000180899 440 ntBASIC22.51■■□□□ 1.19
Ddx41Q91VN6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx41Q91VN6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx41Q91VN6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx41Q91VN6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx41Q91VN6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Ddx41Q91VN6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx41Q91VN6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Ddx41Q91VN6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx41Q91VN6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx41Q91VN6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ddx41Q91VN6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx41Q91VN6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Ddx41Q91VN6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx41Q91VN6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ddx41Q91VN6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.45■■□□□ 1.19
Ddx41Q91VN6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ddx41Q91VN6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms