Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.5■■□□□ 1.03
Upb1Q8VC97 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Gm10493-201ENSMUST00000097270 612 ntBASIC21.5■■□□□ 1.03
Upb1Q8VC97 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upb1Q8VC97 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.49■■□□□ 1.03
Upb1Q8VC97 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Upb1Q8VC97 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upb1Q8VC97 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.47■■□□□ 1.03
Upb1Q8VC97 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Upb1Q8VC97 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Upb1Q8VC97 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Upb1Q8VC97 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.46■■□□□ 1.03
Upb1Q8VC97 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Upb1Q8VC97 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upb1Q8VC97 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Upb1Q8VC97 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.45■■□□□ 1.02
Upb1Q8VC97 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Upb1Q8VC97 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.44■■□□□ 1.02
Upb1Q8VC97 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Upb1Q8VC97 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.43■■□□□ 1.02
Upb1Q8VC97 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.43■■□□□ 1.02
Upb1Q8VC97 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upb1Q8VC97 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.42■■□□□ 1.02
Upb1Q8VC97 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.42■■□□□ 1.02
Upb1Q8VC97 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Upb1Q8VC97 Gm27801-201ENSMUST00000184174 223 ntBASIC21.42■■□□□ 1.02
Upb1Q8VC97 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.42■■□□□ 1.02
Upb1Q8VC97 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.42■■□□□ 1.02
Upb1Q8VC97 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.42■■□□□ 1.02
Upb1Q8VC97 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upb1Q8VC97 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upb1Q8VC97 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upb1Q8VC97 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.41■■□□□ 1.02
Upb1Q8VC97 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upb1Q8VC97 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Upb1Q8VC97 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Upb1Q8VC97 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms