Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Cd109Q8R422 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cd109Q8R422 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Cd109Q8R422 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Cd109Q8R422 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Cd109Q8R422 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cd109Q8R422 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Cd109Q8R422 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Cd109Q8R422 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cd109Q8R422 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cd109Q8R422 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Cd109Q8R422 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cd109Q8R422 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Cd109Q8R422 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cd109Q8R422 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Cd109Q8R422 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cd109Q8R422 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cd109Q8R422 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cd109Q8R422 Gm7514-201ENSMUST00000209475 934 ntBASIC28.32■■■□□ 2.12
Cd109Q8R422 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Cd109Q8R422 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cd109Q8R422 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Cd109Q8R422 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC28.31■■■□□ 2.12
Cd109Q8R422 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cd109Q8R422 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC28.31■■■□□ 2.12
Cd109Q8R422 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC28.31■■■□□ 2.12
Cd109Q8R422 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cd109Q8R422 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cd109Q8R422 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cd109Q8R422 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cd109Q8R422 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cd109Q8R422 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Cd109Q8R422 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC28.3■■■□□ 2.12
Cd109Q8R422 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cd109Q8R422 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cd109Q8R422 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cd109Q8R422 Gm13146-201ENSMUST00000118508 780 ntBASIC28.29■■■□□ 2.12
Cd109Q8R422 CT010467.1-202ENSMUST00000205406 714 ntBASIC28.29■■■□□ 2.12
Cd109Q8R422 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cd109Q8R422 AC112142.1-201ENSMUST00000228796 918 ntBASIC28.29■■■□□ 2.12
Cd109Q8R422 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cd109Q8R422 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cd109Q8R422 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cd109Q8R422 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Cd109Q8R422 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cd109Q8R422 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Cd109Q8R422 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC28.28■■■□□ 2.12
Cd109Q8R422 Gm10602-201ENSMUST00000098239 609 ntBASIC28.28■■■□□ 2.12
Cd109Q8R422 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cd109Q8R422 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cd109Q8R422 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC28.28■■■□□ 2.12
Cd109Q8R422 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC28.27■■■□□ 2.12
Cd109Q8R422 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC28.27■■■□□ 2.12
Cd109Q8R422 Gm12669-201ENSMUST00000122162 1009 ntBASIC28.27■■■□□ 2.12
Cd109Q8R422 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cd109Q8R422 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cd109Q8R422 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cd109Q8R422 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Cd109Q8R422 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC28.27■■■□□ 2.12
Cd109Q8R422 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cd109Q8R422 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Cd109Q8R422 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cd109Q8R422 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Cd109Q8R422 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC28.26■■■□□ 2.12
Cd109Q8R422 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC28.26■■■□□ 2.12
Cd109Q8R422 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Cd109Q8R422 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Cd109Q8R422 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cd109Q8R422 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
Cd109Q8R422 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cd109Q8R422 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC28.26■■■□□ 2.11
Cd109Q8R422 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
Cd109Q8R422 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC28.26■■■□□ 2.11
Cd109Q8R422 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC28.26■■■□□ 2.11
Cd109Q8R422 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cd109Q8R422 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Cd109Q8R422 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Cd109Q8R422 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Cd109Q8R422 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cd109Q8R422 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Cd109Q8R422 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cd109Q8R422 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cd109Q8R422 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cd109Q8R422 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cd109Q8R422 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Cd109Q8R422 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC28.24■■■□□ 2.11
Cd109Q8R422 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Cd109Q8R422 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Cd109Q8R422 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC28.24■■■□□ 2.11
Cd109Q8R422 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cd109Q8R422 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cd109Q8R422 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cd109Q8R422 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC28.22■■■□□ 2.11
Cd109Q8R422 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Cd109Q8R422 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cd109Q8R422 Gm38205-201ENSMUST00000192243 258 ntBASIC28.22■■■□□ 2.11
Cd109Q8R422 Gm42555-201ENSMUST00000199304 1039 ntBASIC28.22■■■□□ 2.11
Cd109Q8R422 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cd109Q8R422 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Cd109Q8R422 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms