Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Gm43530-201ENSMUST00000195920 274 ntBASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smim4Q8C1Q6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim4Q8C1Q6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smim4Q8C1Q6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Gm5812-201ENSMUST00000061073 957 ntBASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim4Q8C1Q6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim4Q8C1Q6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smim4Q8C1Q6 Gm15546-201ENSMUST00000122095 826 ntBASIC16.46■□□□□ 0.23
Smim4Q8C1Q6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.46■□□□□ 0.23
Smim4Q8C1Q6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.46■□□□□ 0.23
Smim4Q8C1Q6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim4Q8C1Q6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim4Q8C1Q6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smim4Q8C1Q6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Smim4Q8C1Q6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.46■□□□□ 0.22
Smim4Q8C1Q6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim4Q8C1Q6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 Etf1-202ENSMUST00000180351 108 ntBASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Smim4Q8C1Q6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms