Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpa1Q8BLA8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpa1Q8BLA8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trpa1Q8BLA8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpa1Q8BLA8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
Trpa1Q8BLA8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpa1Q8BLA8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpa1Q8BLA8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpa1Q8BLA8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trpa1Q8BLA8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.64■□□□□ 0.9
Trpa1Q8BLA8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpa1Q8BLA8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trpa1Q8BLA8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpa1Q8BLA8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trpa1Q8BLA8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trpa1Q8BLA8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpa1Q8BLA8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpa1Q8BLA8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trpa1Q8BLA8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trpa1Q8BLA8 Gm12251-201ENSMUST00000117893 792 ntBASIC20.61■□□□□ 0.89
Trpa1Q8BLA8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.61■□□□□ 0.89
Trpa1Q8BLA8 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.61■□□□□ 0.89
Trpa1Q8BLA8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpa1Q8BLA8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpa1Q8BLA8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trpa1Q8BLA8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpa1Q8BLA8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Mir7075-201ENSMUST00000184187 82 ntBASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.6■□□□□ 0.89
Trpa1Q8BLA8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpa1Q8BLA8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 Mir6236-201ENSMUST00000184437 123 ntBASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpa1Q8BLA8 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.58■□□□□ 0.88
Trpa1Q8BLA8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trpa1Q8BLA8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trpa1Q8BLA8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpa1Q8BLA8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpa1Q8BLA8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpa1Q8BLA8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trpa1Q8BLA8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.57■□□□□ 0.88
Trpa1Q8BLA8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trpa1Q8BLA8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpa1Q8BLA8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.57■□□□□ 0.88
Trpa1Q8BLA8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Gm15039-201ENSMUST00000118914 875 ntBASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpa1Q8BLA8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpa1Q8BLA8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms