Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Krr1Q8BGA5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krr1Q8BGA5 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.56■□□□□ 0.56
Krr1Q8BGA5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Krr1Q8BGA5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krr1Q8BGA5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krr1Q8BGA5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krr1Q8BGA5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krr1Q8BGA5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krr1Q8BGA5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.55■□□□□ 0.56
Krr1Q8BGA5 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.55■□□□□ 0.56
Krr1Q8BGA5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krr1Q8BGA5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krr1Q8BGA5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krr1Q8BGA5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krr1Q8BGA5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Krr1Q8BGA5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krr1Q8BGA5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.53■□□□□ 0.56
Krr1Q8BGA5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Krr1Q8BGA5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.53■□□□□ 0.56
Krr1Q8BGA5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Krr1Q8BGA5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Krr1Q8BGA5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krr1Q8BGA5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Gm15546-201ENSMUST00000122095 826 ntBASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.52■□□□□ 0.56
Krr1Q8BGA5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Krr1Q8BGA5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.51■□□□□ 0.55
Krr1Q8BGA5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krr1Q8BGA5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Krr1Q8BGA5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Krr1Q8BGA5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.51■□□□□ 0.55
Krr1Q8BGA5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krr1Q8BGA5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krr1Q8BGA5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krr1Q8BGA5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krr1Q8BGA5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krr1Q8BGA5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Gm7143-201ENSMUST00000222811 859 ntBASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krr1Q8BGA5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krr1Q8BGA5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krr1Q8BGA5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.47■□□□□ 0.55
Krr1Q8BGA5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krr1Q8BGA5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Krr1Q8BGA5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krr1Q8BGA5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms