Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.86■□□□□ 0.61
VcanQ62059 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VcanQ62059 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.85■□□□□ 0.61
VcanQ62059 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.85■□□□□ 0.61
VcanQ62059 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VcanQ62059 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VcanQ62059 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VcanQ62059 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.84■□□□□ 0.61
VcanQ62059 Gm21362-201ENSMUST00000194272 928 ntBASIC18.84■□□□□ 0.61
VcanQ62059 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.84■□□□□ 0.61
VcanQ62059 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VcanQ62059 Gm7290-201ENSMUST00000104990 617 ntBASIC18.84■□□□□ 0.61
VcanQ62059 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VcanQ62059 Gm12918-201ENSMUST00000120234 636 ntBASIC18.84■□□□□ 0.61
VcanQ62059 Gm15710-201ENSMUST00000121821 636 ntBASIC18.84■□□□□ 0.61
VcanQ62059 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VcanQ62059 Gm5075-201ENSMUST00000196916 622 ntBASIC18.84■□□□□ 0.61
VcanQ62059 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
VcanQ62059 Gm6365-201ENSMUST00000054711 744 ntBASIC18.84■□□□□ 0.61
VcanQ62059 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.84■□□□□ 0.61
VcanQ62059 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.84■□□□□ 0.61
VcanQ62059 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
VcanQ62059 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.83■□□□□ 0.61
VcanQ62059 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VcanQ62059 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
VcanQ62059 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VcanQ62059 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VcanQ62059 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VcanQ62059 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VcanQ62059 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VcanQ62059 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.82■□□□□ 0.6
VcanQ62059 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VcanQ62059 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VcanQ62059 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VcanQ62059 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VcanQ62059 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VcanQ62059 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VcanQ62059 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VcanQ62059 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VcanQ62059 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.82■□□□□ 0.6
VcanQ62059 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VcanQ62059 Gm6576-201ENSMUST00000169678 883 ntBASIC18.81■□□□□ 0.6
VcanQ62059 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.81■□□□□ 0.6
VcanQ62059 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VcanQ62059 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VcanQ62059 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VcanQ62059 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.81■□□□□ 0.6
VcanQ62059 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VcanQ62059 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VcanQ62059 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VcanQ62059 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VcanQ62059 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VcanQ62059 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VcanQ62059 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VcanQ62059 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VcanQ62059 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VcanQ62059 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.8■□□□□ 0.6
VcanQ62059 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VcanQ62059 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VcanQ62059 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VcanQ62059 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VcanQ62059 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VcanQ62059 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VcanQ62059 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VcanQ62059 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VcanQ62059 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VcanQ62059 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VcanQ62059 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VcanQ62059 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VcanQ62059 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.78■□□□□ 0.6
VcanQ62059 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.78■□□□□ 0.6
VcanQ62059 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VcanQ62059 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.78■□□□□ 0.6
VcanQ62059 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.78■□□□□ 0.6
VcanQ62059 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.78■□□□□ 0.6
VcanQ62059 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VcanQ62059 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VcanQ62059 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VcanQ62059 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VcanQ62059 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.77■□□□□ 0.6
VcanQ62059 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.77■□□□□ 0.6
VcanQ62059 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VcanQ62059 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VcanQ62059 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VcanQ62059 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VcanQ62059 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VcanQ62059 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VcanQ62059 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms