Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mir7075-201ENSMUST00000184187 82 ntBASIC18.18■□□□□ 0.5
Col10a1Q05306 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col10a1Q05306 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col10a1Q05306 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col10a1Q05306 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col10a1Q05306 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col10a1Q05306 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col10a1Q05306 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.18■□□□□ 0.5
Col10a1Q05306 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Col10a1Q05306 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col10a1Q05306 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col10a1Q05306 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col10a1Q05306 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col10a1Q05306 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Col10a1Q05306 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col10a1Q05306 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.17■□□□□ 0.5
Col10a1Q05306 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col10a1Q05306 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Col10a1Q05306 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col10a1Q05306 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col10a1Q05306 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col10a1Q05306 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Col10a1Q05306 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.16■□□□□ 0.5
Col10a1Q05306 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.16■□□□□ 0.5
Col10a1Q05306 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col10a1Q05306 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col10a1Q05306 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.15■□□□□ 0.5
Col10a1Q05306 Gm12251-201ENSMUST00000117893 792 ntBASIC18.15■□□□□ 0.5
Col10a1Q05306 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.15■□□□□ 0.5
Col10a1Q05306 Spcs1-204ENSMUST00000226782 949 ntBASIC18.15■□□□□ 0.5
Col10a1Q05306 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.15■□□□□ 0.5
Col10a1Q05306 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col10a1Q05306 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col10a1Q05306 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col10a1Q05306 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col10a1Q05306 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Col10a1Q05306 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col10a1Q05306 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col10a1Q05306 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col10a1Q05306 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col10a1Q05306 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col10a1Q05306 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col10a1Q05306 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col10a1Q05306 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col10a1Q05306 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col10a1Q05306 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col10a1Q05306 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col10a1Q05306 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Col10a1Q05306 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col10a1Q05306 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col10a1Q05306 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col10a1Q05306 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.13■□□□□ 0.49
Col10a1Q05306 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.12■□□□□ 0.49
Col10a1Q05306 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Col10a1Q05306 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.12■□□□□ 0.49
Col10a1Q05306 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Col10a1Q05306 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col10a1Q05306 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.12■□□□□ 0.49
Col10a1Q05306 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.11■□□□□ 0.49
Col10a1Q05306 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.11■□□□□ 0.49
Col10a1Q05306 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col10a1Q05306 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms