Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd3P97770 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Thumpd3P97770 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Thumpd3P97770 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Thumpd3P97770 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Thumpd3P97770 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.98■□□□□ 0.79
Thumpd3P97770 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Thumpd3P97770 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Thumpd3P97770 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd3P97770 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd3P97770 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd3P97770 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Thumpd3P97770 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd3P97770 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.97■□□□□ 0.79
Thumpd3P97770 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Thumpd3P97770 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd3P97770 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd3P97770 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Thumpd3P97770 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.96■□□□□ 0.79
Thumpd3P97770 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.96■□□□□ 0.79
Thumpd3P97770 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thumpd3P97770 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.96■□□□□ 0.79
Thumpd3P97770 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Thumpd3P97770 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thumpd3P97770 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Thumpd3P97770 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thumpd3P97770 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thumpd3P97770 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Thumpd3P97770 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd3P97770 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Thumpd3P97770 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd3P97770 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd3P97770 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Thumpd3P97770 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd3P97770 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd3P97770 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd3P97770 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd3P97770 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd3P97770 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Thumpd3P97770 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.93■□□□□ 0.78
Thumpd3P97770 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd3P97770 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Thumpd3P97770 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.92■□□□□ 0.78
Thumpd3P97770 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thumpd3P97770 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.92■□□□□ 0.78
Thumpd3P97770 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Thumpd3P97770 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thumpd3P97770 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Thumpd3P97770 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd3P97770 Gm12922-201ENSMUST00000120626 809 ntBASIC19.91■□□□□ 0.78
Thumpd3P97770 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.91■□□□□ 0.78
Thumpd3P97770 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd3P97770 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.91■□□□□ 0.78
Thumpd3P97770 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.91■□□□□ 0.78
Thumpd3P97770 Gm21956-201ENSMUST00000179946 522 ntBASIC19.91■□□□□ 0.78
Thumpd3P97770 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd3P97770 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd3P97770 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Thumpd3P97770 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd3P97770 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Thumpd3P97770 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.9■□□□□ 0.78
Thumpd3P97770 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd3P97770 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms