Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tubgcp3P58854 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Golgb1-201ENSMUST00000023534 498 ntBASIC20.11■□□□□ 0.81
Tubgcp3P58854 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tubgcp3P58854 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tubgcp3P58854 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp3P58854 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp3P58854 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Tubgcp3P58854 Gm12922-201ENSMUST00000120626 809 ntBASIC20.09■□□□□ 0.81
Tubgcp3P58854 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.09■□□□□ 0.81
Tubgcp3P58854 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.09■□□□□ 0.81
Tubgcp3P58854 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp3P58854 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Tubgcp3P58854 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tubgcp3P58854 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Tubgcp3P58854 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tubgcp3P58854 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Tubgcp3P58854 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.08■□□□□ 0.81
Tubgcp3P58854 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tubgcp3P58854 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tubgcp3P58854 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tubgcp3P58854 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tubgcp3P58854 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Tubgcp3P58854 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Tubgcp3P58854 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.08■□□□□ 0.8
Tubgcp3P58854 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubgcp3P58854 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubgcp3P58854 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubgcp3P58854 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp3P58854 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp3P58854 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.07■□□□□ 0.8
Tubgcp3P58854 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp3P58854 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp3P58854 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp3P58854 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp3P58854 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubgcp3P58854 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.06■□□□□ 0.8
Tubgcp3P58854 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Tubgcp3P58854 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp3P58854 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp3P58854 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp3P58854 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.05■□□□□ 0.8
Tubgcp3P58854 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp3P58854 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubgcp3P58854 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.04■□□□□ 0.8
Tubgcp3P58854 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.04■□□□□ 0.8
Tubgcp3P58854 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubgcp3P58854 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp3P58854 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp3P58854 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.03■□□□□ 0.8
Tubgcp3P58854 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp3P58854 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubgcp3P58854 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms